Parallel Minimum Spanning Tree-based Clustering Techniques: Parallel Minimum Spanning Tree-based Clustering Techniques for Gene Expression Analysis - Couverture souple

Elsayad, Dina; Khalifa, Amal

 
9783659481680: Parallel Minimum Spanning Tree-based Clustering Techniques: Parallel Minimum Spanning Tree-based Clustering Techniques for Gene Expression Analysis
Couverture souple
ISBN 10 : 3659481688 ISBN 13 : 9783659481680
Editeur : LAP LAMBERT Academic Publishing, 2013

Synopsis

This book is dedicated to interested people in Bioinformatics, High performance computing, Microarrays data clustering, Gene expression analysis. The DNA Microarrays technology is a high-throughput experimental technique that can measure expression levels of hundreds of thousands of genes simultaneously. The DNA microarrays data clustering aims to organize genes that those with similar expression patterns are grouped together to identifying biologically relevant groups of genes. This book proposed three minimum spanning tree -based clustering algorithms for gene expression analysis. The performance of the proposed algorithms (iCLUMP, iCLUMP-2 and hiCLUMP) was tested on a 45 processing nodes cluster using various cancer microarrays data sets. The results showed that the order of the proposed algorithms in terms of minimum runtime and maximum speedup/efficiency is iCLUMP-2 , iCLUMP and hiCLUMP. Furthermore the quality of the cluster produced by the iCLUMP-2 algorithm is much better than those produced by the other algorithms.

Les informations fournies dans la section « Synopsis » peuvent faire référence à une autre édition de ce titre.

Éditeur
LAP LAMBERT Academic Publishing
Date d'édition
2013
Langue
anglais
ISBN 10 
3659481688
ISBN 13 
9783659481680
Reliure
Broché
Nombre de pages
112
Coordonnées du fabricant
non disponible
Personne responsable
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